Stem-loop ocu-mir-302c

Accession

MI0030988

Description

Oryctolagus cuniculus ocu-mir-302c precursor miRNA

Literature search

12 open access papers mention ocu-mir-302c
(26 sentences)

Sequence

741 reads, 2.0 reads per million, 20 experiments

ccuuugcUUUAACAUGGGGGUACCUGCUgugugaaacaaaagUAAGUGCUUCCAUGUUUCAGUggagg
((((((((..(((((((((((((.((((.(((...)))..)))).)))))))))))))..))))))))

Structure

        UU             C    -g   g 
ccuuugcU  AACAUGGGGGUAC UGCU  ugu  
||||||||  ||||||||||||| ||||  ||| a
ggaggUGA  UUGUACCUUCGUG AUga  aca  
        CU             A    aa   a 

Annotation confidence High

Genome context

CM000804.1: 36769770-36769837 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-302c

Mature ocu-miR-302c-5p

• Accession: MIMAT0036318
• Description: Oryctolagus cuniculus ocu-miR-302c-5p mature miRNA
• Sequence: 8 - UUUAACAUGGGGGUACCUGCU - 28
• Evidence: experimental ; SOLiD [1]

Mature ocu-miR-302c-3p

• Accession: MIMAT0036319
• Description: Oryctolagus cuniculus ocu-miR-302c-3p mature miRNA
• Sequence: 43 - UAAGUGCUUCCAUGUUUCAGU - 63
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23426804
   Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
   "Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
   "Reproduction (2013) 145:421-437