Stem-loop gsa-mir-9397

Accession

MI0028989

Description

Gyrodactylus salaris gsa-mir-9397 precursor miRNA

Sequence

AGAUGUAUUCUUGGCACGAGAacccaacaaucgacucucuaucgauuucaaaUCUCGGCUAAAAUUGCAUCGCUU
.((((((...(((((.(((((.......((((((.......)))))).....))))))))))...))))))....

Structure

---A      UUC     A     acccaac      cu 
    GAUGUA   UUGGC CGAGA       aaucga  c
    ||||||   ||||| |||||       ||||||  u
    CUACGU   AAUCG GCUCU       uuagcu  c
UUCG      UAA     -     --aaacu      au 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9397-5p

• Accession: MIMAT0035340
• Description: Gyrodactylus salaris gsa-miR-9397-5p mature miRNA
• Sequence: 1 - AGAUGUAUUCUUGGCACGAGA - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9397-3p

• Accession: MIMAT0035341
• Description: Gyrodactylus salaris gsa-miR-9397-3p mature miRNA
• Sequence: 53 - UCUCGGCUAAAAUUGCAUCGCUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628