miRBase entry: dme-mir-9388

Stem-loop dme-mir-9388


Accession
MI0028938
Description
Drosophila melanogaster dme-mir-9388 precursor miRNA


Sequence

1611 reads, 201 reads per million, 17 experiments
caaguauuuugguacGUAUGUAUGUAUGUACAUACAUGuguauaugguacauucaUGUAGUACAUACAUACAUAUGUaugcaaguacguacg
...((((((..((((((((((((((((((((.(((((((((((...)))))..))))))))))))))))))))))))))..)))))).....

Structure
--caa      ug                    A      --     a 
     guauuu  guacGUAUGUAUGUAUGUAC UACAUG  uguau  
     ||||||  |||||||||||||||||||| ||||||  ||||| u
     caugaa  uaUGUAUACAUACAUACAUG AUGUac  acaug  
gcaug      cg                    -      uu     g 


Annotation confidence High
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Genome context
chr3L: 22945116-22945207 [+]

Database links

Mature dme-miR-9388-5p

Accession MIMAT0035238
Description Drosophila melanogaster dme-miR-9388-5p mature miRNA
Sequence 16 - GUAUGUAUGUAUGUACAUACAUG - 38
Evidence experimental
Illumina [1]
Database links

Mature dme-miR-9388-3p

Accession MIMAT0035239
Description Drosophila melanogaster dme-miR-9388-3p mature miRNA
Sequence 56 - UGUAGUACAUACAUACAUAUGU - 77
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 23882112
    The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution
    "Mohammed J, Flynt AS, Siepel A, Lai EC"
    "RNA (2013) 19:1295-1308