Stem-loop cel-mir-8202

Accession

MI0026833

Description

Caenorhabditis elegans cel-mir-8202 precursor miRNA

Sequence

269 reads, 14 reads per million, 15 experiments

UGAACAGAAAAAGUCGUGUGUuucaagaagucgauaauauucaagacuuaauuuuuuuguugcAGAGACAUUUUGGACAAUUGC
((..(((((...(((.(.(((..(((((((((............))))......)))))..))).)))).)))))..)).....

Structure

-----  AA     AAA   G G   uu     ------    gauaa 
     UG  CAGAA   GUC U UGU  caaga      aguc     u
     ||  |||||   ||| | |||  |||||      ||||      
     AC  GUUUU   CAG A Acg  guuuu      ucag     a
CGUUA  AG     --A   - G   uu     uuuaau    aacuu 

Annotation confidence Not enough data

Genome context

chrIV: 6178148-6178231 [-]

Mature cel-miR-8202-5p

• Accession: MIMAT0032817
• Description: Caenorhabditis elegans cel-miR-8202-5p mature miRNA
• Sequence: 1 - UGAACAGAAAAAGUCGUGUGU - 21
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8202-3p

• Accession: MIMAT0032818
• Description: Caenorhabditis elegans cel-miR-8202-3p mature miRNA
• Sequence: 64 - AGAGACAUUUUGGACAAUUGC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260