Stem-loop cel-mir-8197

Accession

MI0026828

Description

Caenorhabditis elegans cel-mir-8197 precursor miRNA

Sequence

5 reads, 0 reads per million, 2 experiments

AGUGCUUUGCUCCACCCAACUCguaaccaauuagaaagaugggaaggaGUUGGCAAAGCAAGGUUCUGA
((.((((((((....(((((((.(..(((..........)))..).)))))))...)))))))).))..

Structure

--  U        CCAC       g aa   auua 
  AG GCUUUGCU    CCAACUC u  cca    g
  || ||||||||    ||||||| |  |||     
  UC UGGAACGA    GGUUGag a  ggu    a
AG  U        -AAC       g ag   agaa 

Annotation confidence Not enough data

Genome context

chrV: 15150353-15150421 [+]

Mature cel-miR-8197-5p

• Accession: MIMAT0032807
• Description: Caenorhabditis elegans cel-miR-8197-5p mature miRNA
• Sequence: 1 - AGUGCUUUGCUCCACCCAACUC - 22
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8197-3p

• Accession: MIMAT0032808
• Description: Caenorhabditis elegans cel-miR-8197-3p mature miRNA
• Sequence: 49 - GUUGGCAAAGCAAGGUUCUGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260