Stem-loop cel-mir-8190

Accession

MI0026821

Description

Caenorhabditis elegans cel-mir-8190 precursor miRNA

Sequence

13 reads, 1 reads per million, 6 experiments

CGGGAAAUCGCUUUGGAAUCCAGGAaauccgggaauuucgggAUUCCUACCGAUUUUCAGCG
..((((((((....(((((((..(((((......))))).)))))))...))))))))....

Structure

--CG        CUUU       AG     cc 
    GGAAAUCG    GGAAUCC  GAaau  g
    ||||||||    |||||||  |||||   
    CUUUUAGC    CCUUAgg  cuuua  g
GCGA        -CAU       -g     ag 

Annotation confidence Not enough data

Genome context

chrI: 11096994-11097055 [+]

Mature cel-miR-8190-5p

• Accession: MIMAT0032793
• Description: Caenorhabditis elegans cel-miR-8190-5p mature miRNA
• Sequence: 1 - CGGGAAAUCGCUUUGGAAUCCAGGA - 25
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8190-3p

• Accession: MIMAT0032794
• Description: Caenorhabditis elegans cel-miR-8190-3p mature miRNA
• Sequence: 43 - AUUCCUACCGAUUUUCAGCG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260