Stem-loop cel-mir-8189

Accession

MI0026820

Description

Caenorhabditis elegans cel-mir-8189 precursor miRNA

Sequence

352 reads, 2 reads per million, 10 experiments

UCUCUUAUCCACUAGGCCACGAgugccagcgcccucaaggagucggguccgcAUGGCCUAGUGGAUAAGAGGGA
(((((((((((((((((((.(.(.(((.((.((.....)).))..))).).).)))))))))))))))))))..

Structure

--                   C A u   -a  g  c 
  UCUCUUAUCCACUAGGCCA G g gcc  gc cc u
  ||||||||||||||||||| | | |||  || || c
  GGAGAAUAGGUGAUCCGGU c c ugg  ug gg a
AG                   A g c   gc  a  a 

Annotation confidence Not enough data

Genome context

chrIV: 2079009-2079082 [+]

Mature cel-miR-8189-5p

• Accession: MIMAT0032791
• Description: Caenorhabditis elegans cel-miR-8189-5p mature miRNA
• Sequence: 1 - UCUCUUAUCCACUAGGCCACGA - 22
• Evidence: experimental ; SOLiD [1]

Mature cel-miR-8189-3p

• Accession: MIMAT0032792
• Description: Caenorhabditis elegans cel-miR-8189-3p mature miRNA
• Sequence: 53 - AUGGCCUAGUGGAUAAGAGGGA - 74
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260