Stem-loop cel-mir-8187

Accession

MI0026818

Description

Caenorhabditis elegans cel-mir-8187 precursor miRNA

Sequence

694 reads, 4 reads per million, 9 experiments

UCGGGAAUGCCUACGCCUGCuuaccugccuauuaggcauggaauaggcacguaggcAGGCAAGAUGUAGGCACGAUG
(((....(((((((((((((((((.((((((((........)))))))).)))))))))).....))))))))))..

Structure

--   GGAA       -----          c        agg 
  UCG    UGCCUAC     GCCUGCuuac ugccuauu   c
  |||    |||||||     |||||||||| ||||||||    
  AGC    ACGGAUG     CGGAcggaug acggauaa   a
GU   ----       UAGAA          c        ggu 

Annotation confidence Not enough data

Genome context

chrI: 14368397-14368473 [-]

Mature cel-miR-8187-5p

• Accession: MIMAT0032787
• Description: Caenorhabditis elegans cel-miR-8187-5p mature miRNA
• Sequence: 1 - UCGGGAAUGCCUACGCCUGC - 20
• Evidence: experimental ; SOLiD [1]

Mature cel-miR-8187-3p

• Accession: MIMAT0032788
• Description: Caenorhabditis elegans cel-miR-8187-3p mature miRNA
• Sequence: 57 - AGGCAAGAUGUAGGCACGAUG - 77
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260