Stem-loop stu-MIR156d

Accession

MI0025965

Description

Solanum tuberosum stu-MIR156d precursor miRNA

Literature search

10 open access papers mention stu-MIR156d
(24 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACuaaugaugauaugcuaauuucauucagcaaaagcaucucacuucauuuguGCUCUCUAUGCUUCUGUCAUCA
.((((((((((((((((((((.((((((((.(((((................))))).)))..))))).))))))))))).)))))))))...

Structure

--U         -           u     --   u     aauuuca 
   UGACAGAAG AUAGAGAGCAC aauga  uga augcu       u
   ||||||||| ||||||||||| |||||  ||| |||||        
   ACUGUCUUC UAUCUCUCGug uuacu  acu uacga       u
ACU         G           u     uc   c     aaacgac 

Annotation confidence Low

Genome context

JH138336.1: 107387-107479 [+]

Mature stu-miR156d-5p

• Accession: MIMAT0031299
• Description: Solanum tuberosum stu-miR156d-5p mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR156d-3p

• Accession: MIMAT0031300
• Description: Solanum tuberosum stu-miR156d-3p mature miRNA
• Sequence: 72 - GCUCUCUAUGCUUCUGUCAUCA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233