Stem-loop stu-MIR8000

Accession

MI0025799

Description

Solanum tuberosum stu-MIR8000 precursor miRNA

Literature search

1 open access papers mention stu-MIR8000
(8 sentences)

Sequence

ACACCGAAGAACUGACACCGAAGAaccaaauuuuuucgguucgguuuuucgguauuu
..(((((((((((((.(((((((((......))))))))))))))))))))))....

Structure

--AC             C         cc 
    ACCGAAGAACUGA ACCGAAGAa  a
    ||||||||||||| |||||||||   
    uggcuuuuuggcu uggcuuuuu  a
uuua             -         ua 

Annotation confidence Not enough data

Genome context

JH137869.1: 279923-279979 [+]

Mature stu-miR8000

• Accession: MIMAT0030890
• Description: Solanum tuberosum stu-miR8000 mature miRNA
• Sequence: 1 - ACACCGAAGAACUGACACCGAAGA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233