Stem-loop stu-MIR7996b

Accession

MI0025792

Description

Solanum tuberosum stu-MIR7996b precursor miRNA

Sequence

AUGUGGUACAUAUGAAAUUUGAAAuuaaucaauuuuuuaguauguuuuuauauauuuuaaguugcuaauuauuuguauuuagaguauguuuuacguaaauauauuagaaaucacaauaauuaacaaguuaauauaaaaaaaaacuuauaaaaaauucauugacuuuugaaauuucauuuguaucacauaa
((((((((((.(((((((((.((((((((.(((((((((....((((((...(((.((((.(((.((((((((.((((((..(((((((((.....)))))))))..)))).)))))))))).))).)))).)))...))))))...))))))))).)))))..))).))))))))).))))))))))..

Structure

--          U         G   --     c         guau      aua   u    g   c        u  -    ag         u 
  AUGUGGUACA AUGAAAUUU AAA  uuaau aauuuuuua    guuuuu   uau uuaa uug uaauuauu gu auuu  aguauguuu a
  |||||||||| ||||||||| |||  ||||| |||||||||    ||||||   ||| |||| ||| |||||||| || ||||  ||||||||| c
  uacacuaugu uacuuuaaa uuu  aguua uuaaaaaau    caaaaa   aua aauu aac auuaauaa ca uaaa  uuauauaaa g
aa          u         g   uc     c         -auu      aaa   u    g   a        -  c    ga         u 

Annotation confidence Not enough data

Genome context

JH137822.1: 2556836-2557025 [+]

Mature stu-miR7996b

• Accession: MIMAT0030883
• Description: Solanum tuberosum stu-miR7996b mature miRNA
• Sequence: 1 - AUGUGGUACAUAUGAAAUUUGAAA - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233