Stem-loop stu-MIR7994b

Accession

MI0025789

Description

Solanum tuberosum stu-MIR7994b precursor miRNA

Sequence

AGUUUAUGCCCAAGUAUAUAAUAUAUaauauucaagauugagacuuuuaaaagggaguuuauguccaaguauaauauauaauauucaagauuagaacuuuagucccaaucuugaauauuauAUAUUAUACUUGGGCAUAAACUCC
((((((((((((((((((..((((((((((((((((((((.((((........(((((((..(((..(((((........)))))...)))..))))))))))).))))))))))))))))))))))))))))))))))))))..

Structure

--                  UA                    a    uuuaaaag       au   -ca     aau 
  AGUUUAUGCCCAAGUAUA  AUAUAUaauauucaagauug gacu        ggaguuu  guc   aguau   a
  ||||||||||||||||||  |||||||||||||||||||| ||||        |||||||  |||   |||||    
  UCAAAUACGGGUUCAUAU  UAUAuauuauaaguucuaac cuga        uuucaag  uag   uuaua   u
CC                  --                    c    --------       au   aac     aua 

Annotation confidence Not enough data

Genome context

JH137885.1: 442742-442886 [-]

Mature stu-miR7994b-5p

• Accession: MIMAT0031188
• Description: Solanum tuberosum stu-miR7994b-5p mature miRNA
• Sequence: 1 - AGUUUAUGCCCAAGUAUAUAAUAUAU - 26
• Evidence: experimental ; Illumina [1]

Mature stu-miR7994b-3p

• Accession: MIMAT0030880
• Description: Solanum tuberosum stu-miR7994b-3p mature miRNA
• Sequence: 122 - AUAUUAUACUUGGGCAUAAACUCC - 145
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233