Stem-loop pgi-MIR6139

Accession

MI0021310

Description

Panax ginseng pgi-MIR6139 precursor miRNA

Literature search

1 open access papers mention pgi-MIR6139
(9 sentences)

Sequence

accaauuuauucucuuucucaauguuucuuauucaauucaaucaauuacuuuuuauucaaccaauuacuacuuggauuauagaauugaauugaauAAGAAUCAUUGGGAAGGGAAGAAAgcuuu
.........(((.(((((((((((.(((((((((((((((((.........(((((....((((.......))))...)))))))))))))))))))))).)))))))))))))).........

Structure

accaauuua   u           u                 caauuacuu     ucaa    uu 
         uuc cuuucucaaug uucuuauucaauucaau         uuuau    ccaa  a
         ||| ||||||||||| |||||||||||||||||         |||||    ||||  c
         AAG GGAAGGGUUAC AAGAAuaaguuaaguua         agaua    gguu  u
uuucgAAAG   -           U                 ---------     -uua    ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6139

• Accession: MIMAT0027260
• Description: Panax ginseng pgi-miR6139 mature miRNA
• Sequence: 96 - AAGAAUCAUUGGGAAGGGAAGAAA - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385