Stem-loop pgi-MIR6135j

Accession

MI0021302

Description

Panax ginseng pgi-MIR6135j precursor miRNA

Literature search

1 open access papers mention pgi-MIR6135j
(3 sentences)

Sequence

ggaagcgguuaguaugaaguuuauuuugggguaaguugaucAAUUGACUAAUAGAAUACUGACACgcaggcgagguuguaugcguaucaguauuuuauugaucaauuaacuaauuuaucaaaaaaauaacuucauauuaacuggaucc
(((..((((((((((((((((..((((..(((((((((...((((((.((((((((((((((.(((((.(((....))).))))).)))))))))))))).))))))...)))))))))..))))..))))))))))))))))..)))

Structure

   ag                ua    gg         auc      C              C     g   a 
gga  cgguuaguaugaaguu  uuuu  gguaaguug   AAUUGA UAAUAGAAUACUGA ACgca gcg g
|||  ||||||||||||||||  ||||  |||||||||   |||||| |||||||||||||| ||||| |||  
ccu  gucaauuauacuucaa  aaaa  cuauuuaau   uuaacu guuauuuuaugacu ugcgu ugu g
   ag                ua    aa         caa      a              a     a   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR6135j

• Accession: MIMAT0027251
• Description: Panax ginseng pgi-miR6135j mature miRNA
• Sequence: 42 - AAUUGACUAAUAGAAUACUGACAC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385