Stem-loop pgi-MIR482b

Accession

MI0021291

Description

Panax ginseng pgi-MIR482b precursor miRNA

Literature search

1 open access papers mention pgi-MIR482b
(9 sentences)

Sequence

auuuuUCUUGCCAAUUCCUCCCAUUCCaaugguuucaugagguuacuccuuuuccuaucauauccuuguaacccaacacccccauaacguguucgacagagagagagggaaagggagauagaucuagaugaaguuguuuggaugggugauuuggaaagaaaagu
(((((((((.((((.((..(((((((.(((((((((((.(((((.(((((((((((.((...((.((((.....(((((.........)))))..)))).))..)))))))))))))...)))))..))))))))))).))))))).)).)))).)))))))))

Structure

         G    U  CU       C           -g     --a           a  aua  c    aaccc     ccc 
auuuuUCUU CCAA UC  CCCAUUC aaugguuucau  agguu   cuccuuuuccu uc   uc uugu     aacac   c
||||||||| |||| ||  ||||||| |||||||||||  |||||   ||||||||||| ||   || ||||     |||||   a
ugaaaagaa gguu ag  ggguagg uuguugaagua  ucuag   gagggaaaggg ag   ag gaca     uugug   u
         a    u  -u       u           ga     aua           -  -ag  a    ---gc     caa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pgi-miR482b

• Accession: MIMAT0027239
• Description: Panax ginseng pgi-miR482b mature miRNA
• Sequence: 6 - UCUUGCCAAUUCCUCCCAUUCC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22962612
   High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng
   Wu B, Wang M, Ma Y, Yuan L, Lu S
   PLoS One (2012) 7:e44385