Stem-loop gma-MIR482e

Accession

MI0019772

Description

Glycine max gma-MIR482e precursor miRNA

Literature search

21 open access papers mention gma-MIR482e
(41 sentences)

Sequence

4000630 reads, 6229.0 reads per million, 178 experiments

agacaaaauugggggaaggcaugggUAUGGGGGGAUUGGGAAGGAAUauccauaagcaaaauaugcuauuUCUUCCCUACACCUCCCAUACCacuguuuuuccucucuuucuccccc
..........(((((((((((..(((((((((((...(((((((((((..((((.......)))).)))))))))))....)))))))))))..)))))))))))............

Structure

--agacaaaauu           ug           -AUU           uc    ag 
            gggggaaggca  ggUAUGGGGGG    GGGAAGGAAUa  caua  c
            |||||||||||  |||||||||||    |||||||||||  ||||  a
            cuccuuuuugu  CCAUACCCUCC    CCCUUCUuuau  guau  a
cccccucuuucu           ca           ACAU           -c    aa 

Annotation confidence High

Genome context

Unknown

Mature gma-miR482e-5p

• Accession: MIMAT0023227
• Description: Glycine max gma-miR482e-5p mature miRNA
• Sequence: 26 - UAUGGGGGGAUUGGGAAGGAAU - 47
• Evidence: experimental ; Illumina [1]

Mature gma-miR482e-3p

• Accession: MIMAT0054339
• Description: Glycine max gma-miR482e-3p mature miRNA
• Sequence: 71 - UCUUCCCUACACCUCCCAUACC - 92
• Evidence: experimental ; unknown

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553