Stem-loop mtr-MIR5760

Accession

MI0019694

Description

Medicago truncatula mtr-MIR5760 precursor miRNA

Sequence

8239 reads, 103.0 reads per million, 111 experiments

uguuaaucagUGCUUUAAGGAUAUUUGUUAAGGAuuuaauuuuCUUAACAAGUGUCCUUAGGGUGCUuguuagcau
(((((((.((((((((((((((((((((((((((.......)))))))))))))))))))))))))).))))))).

Structure

-       c                          uu 
 uguuaau agUGCUUUAAGGAUAUUUGUUAAGGA  u
 ||||||| ||||||||||||||||||||||||||  a
 acgauug UCGUGGGAUUCCUGUGAACAAUUCuu  a
u       u                          uu 

Annotation confidence Medium

Genome context

chr7: 15223866-15223941 [-]

Mature mtr-miR5760-5p

• Accession: MIMAT0023149
• Description: Medicago truncatula mtr-miR5760-5p mature miRNA
• Sequence: 11 - UGCUUUAAGGAUAUUUGUUAAGGA - 34
• Evidence: experimental ; Illumina [1]

Mature mtr-miR5760-3p

• Accession: MIMAT0055258
• Description: Medicago truncatula mtr-miR5760-3p mature miRNA
• Sequence: 44 - CUUAACAAGUGUCCUUAGGGUGCU - 67
• Evidence: experimental ; unknown

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553