Stem-loop mtr-MIR2593e

Accession

MI0019693

Description

Medicago truncatula mtr-MIR2593e precursor miRNA

Sequence

8483 reads, 63.0 reads per million, 111 experiments

uUUUGACUUUUAGAUUCAUUCAAUCAauaauguauuuggucuauaauauaaaucacauacaucaUUGAUUGAAUGAACCUAAAAGUuaaa
.((((((((((((.((((((((((((((.((((((.((((.(((...))).)))).)))))).)))))))))))))).))))))))))))

Structure

u            A              a      u    c   a 
 UUUGACUUUUAG UUCAUUCAAUCAau auguau uggu uau  
 |||||||||||| |||||||||||||| |||||| |||| ||| a
 aaauUGAAAAUC AAGUAAGUUAGUUa uacaua acua aua  
-            C              c      c    a   u 

Annotation confidence Low

Genome context

chr7: 3414785-3414874 [-]

Mature mtr-miR2593e-5p

• Accession: MIMAT0055257
• Description: Medicago truncatula mtr-miR2593e-5p mature miRNA
• Sequence: 2 - UUUGACUUUUAGAUUCAUUCAAUCA - 26
• Evidence: experimental ; unknown

Mature mtr-miR2593e-3p

• Accession: MIMAT0023148
• Description: Medicago truncatula mtr-miR2593e-3p mature miRNA
• Sequence: 65 - UUGAUUGAAUGAACCUAAAAGU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553