Stem-loop mtr-MIR5757

Accession

MI0019686

Description

Medicago truncatula mtr-MIR5757 precursor miRNA

Sequence

2516 reads, 36.0 reads per million, 104 experiments

uaauugaaUCUUGGCUGUCAAACAAAUCUcuauucuugauaguuacaaugguguugcuaauucaaucaucaaagaaUAGAGAUUUGUUUAACAGCCAcgauuugauu
.(((((((((.(((((((.(((((((((((((((((((((.(((....((((...))))....))).))).)))))))))))))))))).))))))).)))))))))

Structure

u         U       C                  -   a   acaa    g 
 aauugaaUC UGGCUGU AAACAAAUCUcuauucuu gau guu    uggu  
 ||||||||| ||||||| |||||||||||||||||| ||| |||    |||| u
 uuaguuuag ACCGACA UUUGUUUAGAGAUaagaa cua uaa    aucg  
-         c       A                  a   c   cuua    u 

Annotation confidence Medium

Genome context

chr5: 31242698-31242804 [+]

Mature mtr-miR5757-5p

• Accession: MIMAT0055253
• Description: Medicago truncatula mtr-miR5757-5p mature miRNA
• Sequence: 9 - UCUUGGCUGUCAAACAAAUCU - 29
• Evidence: experimental ; unknown

Mature mtr-miR5757-3p

• Accession: MIMAT0023141
• Description: Medicago truncatula mtr-miR5757-3p mature miRNA
• Sequence: 77 - UAGAGAUUUGUUUAACAGCCA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553