Stem-loop mtr-MIR5752a

Accession

MI0019678

Description

Medicago truncatula mtr-MIR5752a precursor miRNA

Sequence

464 reads, 4.0 reads per million, 86 experiments

aauaucaaguaaucaucuguagauuUGUGCUAAGACCAAAUAAUGUGuugaaaacaauguguugagaguaucaCAUUGUUUGGUUUAGUACAAAuuuauggaugguuaucaacaucaac
........((((((((((((((((((((((((.((((((((((((((.((..((((...)))).....)).))))))))))))))))))))))))))))))))))))))..........

Structure

--aauaucaa                        A              u  ---aa    a 
          guaaucaucuguagauuUGUGCUA GACCAAAUAAUGUG ug     aaca  
          |||||||||||||||||||||||| |||||||||||||| ||     |||| u
          uauugguagguauuuAAACAUGAU UUGGUUUGUUACac au     uugu  
caacuacaac                        -              u  gagag    g 

Annotation confidence High

Genome context

chr4: 818809-818927 [-]

Mature mtr-miR5752a-5p

• Accession: MIMAT0055247
• Description: Medicago truncatula mtr-miR5752a-5p mature miRNA
• Sequence: 26 - UGUGCUAAGACCAAAUAAUGUG - 47
• Evidence: experimental ; unknown

Mature mtr-miR5752a-3p

• Accession: MIMAT0023133
• Description: Medicago truncatula mtr-miR5752a-3p mature miRNA
• Sequence: 74 - CAUUGUUUGGUUUAGUACAAA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553