Stem-loop mtr-MIR4414b

Accession

MI0018316

Description

Medicago truncatula mtr-MIR4414b precursor miRNA

Literature search

1 open access papers mention mtr-MIR4414b
(1 sentences)

Sequence

82322 reads, 649.0 reads per million, 111 experiments

guuuugaauuAGCUGCUGACUCAUUCAUUCaaacacaauaagaagaagcaugaugaauaugcuauauugugaaugUGUGAAUGAUGCGGGAGCUAAauuucaucuuu
....((((((((((.(((..((((((((.((..(((((((......((((((.....)))))).)))))))..)).))))))))..))).))))))..)))).....

Structure

-guuu    --      G   AC        U  aa       agaaga      a 
     ugaa  uuAGCU CUG  UCAUUCAU Ca  cacaaua      agcaug u
     ||||  |||||| |||  |||||||| ||  |||||||      |||||| g
     acuu  AAUCGA GGC  AGUAAGUG gu  guguuau      ucguau a
uuucu    ua      G   GU        U  aa       -----a      a 

Annotation confidence High

Genome context

Unknown

Mature mtr-miR4414b-5p

• Accession: MIMAT0055087
• Description: Medicago truncatula mtr-miR4414b-5p mature miRNA
• Sequence: 11 - AGCUGCUGACUCAUUCAUUC - 30
• Evidence: experimental ; unknown

Mature mtr-miR4414b-3p

• Accession: MIMAT0021211
• Description: Medicago truncatula mtr-miR4414b-3p mature miRNA
• Sequence: 76 - UGUGAAUGAUGCGGGAGCUAA - 96
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010


2. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553