Stem-loop hsa-mir-5088

Accession

MI0017977

Symbol

HGNC: MIR5088

Description

Homo sapiens hsa-mir-5088 precursor miRNA

Sequence

99 reads, 1 reads per million, 28 experiments

cccauCAGGGCUCAGGGAUUGGAUGGAGGugaugggggcaggggaugggucucacccUCCCUUCUUCCUGGGCCCUCAg
......((((((((((((..(((.(((((.(.(((((.(........).))))))))))).)))))))))))))))...

Structure

cccauC            UU   U     u a     g agg 
      AGGGCUCAGGGA  GGA GGAGG g ugggg c   g
      ||||||||||||  ||| ||||| | ||||| |    
      UCCCGGGUCCUU  CUU CCUcc c acucu g   g
---gAC            --   C     - -     g gua 

Annotation confidence Not enough data

Genome context

chr19: 49682117-49682195 [+]

Disease association

hsa-mir-5088 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-5088-5p

• Accession: MIMAT0021080
• Description: Homo sapiens hsa-miR-5088-5p mature miRNA
• Sequence: 6 - CAGGGCUCAGGGAUUGGAUGGAGG - 29
• Evidence: experimental ; Illumina [1], qPCR [1], meta-analysis [2]

Mature hsa-miR-5088-3p

• Accession: MIMAT0027041
• Description: Homo sapiens hsa-miR-5088-3p mature miRNA
• Sequence: 58 - UCCCUUCUUCCUGGGCCCUCA - 78
• Evidence: experimental ; meta-analysis [2]

References

1. PubMed ID: 21785231
   Detection of novel human MiRNAs responding to X-ray irradiation
   "Ding N, Wu X, He J, Chang L, Hu W, Li W, Wang J, Wang T, Zhou G"
   "J Radiat Res (2011) 52:425-432


2. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645