Stem-loop hsa-mir-5001

Accession

MI0017867

Symbol

HGNC: MIR5001

Description

Homo sapiens hsa-mir-5001 precursor miRNA

Literature search

4 open access papers mention hsa-mir-5001
(9 sentences)

Sequence

487 reads, 5 reads per million, 59 experiments

agcucagggcggcugcgcagAGGGCUGGACUCAGCGGCGGAGCUggcugcuggccucagUUCUGCCUCUGUCCAGGUCCUUgugacccgcccgcucuccu
(((...((((((.(.((((.((((((((((..((.(((((((((((((...))))..))))))))).))))))).)))))))))).))))))))).....

Structure

-----   uca      c g    g     -     UC  C         --    g 
     agc   gggcgg u cgca AGGGC UGGAC  AG GGCGGAGCU  ggcu  
     |||   |||||| | |||| ||||| |||||  || |||||||||  |||| c
     ucg   cccgcc a gugU UCCUG ACCUG  UC CCGUCUUga  ccgg  
uccuc   ---      c -    -     G     --  U         cu    u 

Annotation confidence High

Genome context

chr2: 232550474-232550573 [-]

Disease association

hsa-mir-5001 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-5001-5p

• Accession: MIMAT0021021
• Description: Homo sapiens hsa-miR-5001-5p mature miRNA
• Sequence: 21 - AGGGCUGGACUCAGCGGCGGAGCU - 44
• Evidence: not_experimental

Mature hsa-miR-5001-3p

• Accession: MIMAT0021022
• Description: Homo sapiens hsa-miR-5001-3p mature miRNA
• Sequence: 60 - UUCUGCCUCUGUCCAGGUCCUU - 81
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52


2. PubMed ID: 21558790
   Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis
   "Hansen TB, Kjems J, Bramsen JB"
   "RNA Biol (2011) 8:378-383