Stem-loop cel-mir-4920

Accession

MI0017705

Description

Caenorhabditis elegans cel-mir-4920 precursor miRNA

Sequence

780 reads, 3.0 reads per million, 58 experiments

GUAAGGAAAACUUUUGAAUUUcuuuugagagaaaAUUCAUUUGUGAUUCUUUUCAG
(.((((((.((...((((((((((....))).)))))))...))..)))))).)..

Structure

-- U      -A  UUU       -   u 
  G AAGGAA  AC   UGAAUUU cuu u
  | ||||||  ||   ||||||| |||  
  C UUUCUU  UG   ACUUAaa gag g
GA U      AG  UUU       a   a 

Annotation confidence High

Genome context

chrIV: 8133417-8133472 [-]

Mature cel-miR-4920-5p

• Accession: MIMAT0020126
• Description: Caenorhabditis elegans cel-miR-4920-5p mature miRNA
• Sequence: 1 - GUAAGGAAAACUUUUGAAUUU - 21
• Evidence: experimental ; Illumina [1]

Mature cel-miR-4920-3p

• Accession: MIMAT0053610
• Description: Caenorhabditis elegans cel-miR-4920-3p mature miRNA
• Sequence: 35 - AUUCAUUUGUGAUUCUUUUCAG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177960
   Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
   "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
   "Genome Res (2011) 21:286-300