Stem-loop hsa-mir-548an

Accession

MI0016907

Symbol

HGNC: MIR548AN

Description

Homo sapiens hsa-mir-548an precursor miRNA

Literature search

56 open access papers mention hsa-mir-548an
(171 sentences)

Sequence

1335 reads, 13.0 reads per million, 91 experiments

cauuagguuggugcAAAAGGCAUUGUGGUUUUUGccuauaaaaguaauggCAAAAACCGCAAUUCCUUUUGCaccaaccuaau
.(((((((((((((((((((.(((((((((((((((............))))))))))))))).)))))))))))))))))))

Structure

c                   C               uauaa 
 auuagguuggugcAAAAGG AUUGUGGUUUUUGcc     a
 ||||||||||||||||||| |||||||||||||||      
 uaauccaaccaCGUUUUCC UAACGCCAAAAACgg     a
-                   U               uaaug 

Annotation confidence High

Genome context

chrX: 106639814-106639896 [+]

Mature hsa-miR-548an-5p

• Accession: MIMAT0019079
• Description: Homo sapiens hsa-miR-548an-5p mature miRNA
• Sequence: 15 - AAAAGGCAUUGUGGUUUUUG - 34
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548an-3p

• Accession: MIMAT0050637
• Description: Homo sapiens hsa-miR-548an-3p mature miRNA
• Sequence: 51 - CAAAAACCGCAAUUCCUUUUGC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127