Stem-loop hsa-mir-548aj-2

Accession

MI0016815

Symbol

HGNC: MIR548AJ2

Description

Homo sapiens hsa-mir-548aj-2 precursor miRNA

Literature search

56 open access papers mention hsa-mir-548aj-2
(171 sentences)

Sequence

2326 reads, 16.0 reads per million, 123 experiments

aagguauuagguuggugcAAAAGUAAUUGCAGUUUUUGcuauuacuuuuaaugguAAAAACUGCAAUUACUUUUacaccaaccuaauauuua
.((((((((((((((((.((((((((((((((((((((((((((....)))))))))))))))))))))))))).)))))))))))))))).

Structure

a                c                          c 
 agguauuagguuggug AAAAGUAAUUGCAGUUUUUGcuauua u
 |||||||||||||||| ||||||||||||||||||||||||||  
 uuuauaauccaaccac UUUUCAUUAACGUCAAAAAugguaau u
a                a                          u 

Annotation confidence Medium

Genome context

chrX: 38023895-38023986 [-]

Mature hsa-miR-548aj-5p

• Accession: MIMAT0022739
• Description: Homo sapiens hsa-miR-548aj-5p mature miRNA
• Sequence: 19 - AAAAGUAAUUGCAGUUUUUG - 38
• Evidence: not_experimental

Mature hsa-miR-548aj-3p

• Accession: MIMAT0018990
• Description: Homo sapiens hsa-miR-548aj-3p mature miRNA
• Sequence: 56 - AAAAACUGCAAUUACUUUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127