Stem-loop hsa-mir-3942

Accession

MI0016599

Symbol

HGNC: MIR3942

Description

Homo sapiens hsa-mir-3942 precursor miRNA

Literature search

2 open access papers mention hsa-mir-3942
(6 sentences)

Sequence

221 reads, 2 reads per million, 41 experiments

ucuucaguaugacaccucaaagAAGCAAUACUGUUACCUGAAAUaggcugcgaagauaacaguaUUUCAGAUAACAGUAUUACAUcuuugaagugucauauucacugac
...((((((((((((.(((((((.(.((((((((((.(((((((..((((.........))))))))))).)))))))))).).))))))).)))))))....))))).

Structure

ucu     ----       c       A C          C       ag    cga 
   ucagu    augacac ucaaagA G AAUACUGUUA CUGAAAU  gcug   a
   |||||    ||||||| ||||||| | |||||||||| |||||||  ||||   g
   aguca    uacugug aguuucU C UUAUGACAAU GACUUUa  ugac   a
--c     cuua       a       A A          A       --    aau 

Annotation confidence High

Genome context

chr15: 35372256-35372364 [-]

Mature hsa-miR-3942-5p

• Accession: MIMAT0018358
• Description: Homo sapiens hsa-miR-3942-5p mature miRNA
• Sequence: 23 - AAGCAAUACUGUUACCUGAAAU - 44
• Evidence: experimental ; Illumina [1-3]

Mature hsa-miR-3942-3p

• Accession: MIMAT0019230
• Description: Homo sapiens hsa-miR-3942-3p mature miRNA
• Sequence: 65 - UUUCAGAUAACAGUAUUACAU - 85
• Evidence: experimental ; Illumina [2-3]

References

1. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86


3. PubMed ID: 21606961
   Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
   "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
   "Leukemia (2011) 25:1389-1399