Stem-loop hsa-mir-3622a

Accession

MI0016013

Symbol

HGNC: MIR3622A

Description

Homo sapiens hsa-mir-3622a precursor miRNA mir-3622

Gene
family

RF03703; mir-3622

Literature search

5 open access papers mention hsa-mir-3622a
(10 sentences)

Sequence

231 reads, 12 reads per million, 45 experiments

aauagagggugcaCAGGCACGGGAGCUCAGGUGAGgcagggagcugagcUCACCUGACCUCCCAUGCCUGUgcacccucuauu
(((((((((((((((((((.(((((.(((((((((.(((....)))..))))))))).))))).)))))))))))))))))))

Structure

                   C     C         -g   g 
aauagagggugcaCAGGCA GGGAG UCAGGUGAG  cag g
||||||||||||||||||| ||||| |||||||||  |||  
uuaucucccacgUGUCCGU CCCUC AGUCCACUc  guc a
                   A     C         ga   g 

Annotation confidence High

Genome context

chr8: 27701677-27701759 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3622a

Disease association

hsa-mir-3622a is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3622a-5p

• Accession: MIMAT0018003
• Description: Homo sapiens hsa-miR-3622a-5p mature miRNA
• Sequence: 14 - CAGGCACGGGAGCUCAGGUGAG - 35
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3622a-3p

• Accession: MIMAT0018004
• Description: Homo sapiens hsa-miR-3622a-3p mature miRNA
• Sequence: 50 - UCACCUGACCUCCCAUGCCUGU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86