Stem-loop osa-MIR2907c

Accession

MI0013249

Description

Oryza sativa osa-MIR2907c precursor miRNA

Literature search

1 open access papers mention osa-MIR2907c
(1 sentences)

Sequence

4854 reads, 15.0 reads per million, 101 experiments

gcgcGGCAGCCGAGCGAGGGCCUCGGggcgaagccgcgggagagcccgaggggguGACGUCAUGCCCCGAGGCCCCccccucccgcgc
((((((.....(((.(.(((((((((((((.....(((.....((((....))))..)))..))))))))))))).)..)))))))))

Structure

      CAGCC   -C A             aagcc   ggaga    g 
gcgcGG     GAG  G GGGCCUCGGggcg     gcg     gccc a
||||||     |||  | |||||||||||||     |||     ||||  
cgcgcc     cuc  c CCCGGAGCCCCGU     UGC     uggg g
      -----   cc C             ---AC   ---AG    g 

Annotation confidence Low

Genome context

11: 11906614-11906701 [+]

Mature osa-miR2907c-5p

• Accession: MIMAT0014038
• Description: Oryza sativa osa-miR2907c-5p mature miRNA
• Sequence: 5 - GGCAGCCGAGCGAGGGCCUCGG - 26
• Evidence: experimental ; Northern [1]

Mature osa-miR2907c-3p

• Accession: MIMAT0056152
• Description: Oryza sativa osa-miR2907c-3p mature miRNA
• Sequence: 56 - GACGUCAUGCCCCGAGGCCCC - 76
• Evidence: experimental ; unknown

References

1. PubMed ID: 19796675
   Identification of novel stress-regulated microRNAs from Oryza sativa L
   "Jian X, Zhang L, Li G, Zhang L, Wang X, Cao X, Fang X, Chen F"
   "Genomics (2010) 95:47-55