miRBase entry: osa-MIR2869

Stem-loop osa-MIR2869


Accession
MI0013031
Description
Oryza sativa osa-MIR2869 precursor miRNA


Sequence

8730 reads, 32.0 reads per million, 140 experiments
gggaggaggagcuucccaggauuuaauuUUGGGAGGUGGUGAGUACUAAGgagaacaguauguuguucagcuggcaggagcugcaaggagcaagccgcuggccaggguuugaucCUUGGUACUCAUUACCUCCCGacauuaaauucugggcaggauuaagu
...........((((((((((((((((.(((((((((((((((((((((((((((((......)))))..(((((((..(((((.....)).)))..)).))))).......)))))))))))))))))))))))).))))))))))))).))).......

Structure
gggaggaggag   -             u                        gaacaguauguuguucag     -  ga   -  a 
           cuu cccaggauuuaau UUGGGAGGUGGUGAGUACUAAGga                  cuggc ag  gcu gc a
           ||| ||||||||||||| ||||||||||||||||||||||||                  ||||| ||  ||| || g
           gga gggucuuaaauua aGCCCUCCAUUACUCAUGGUUCcu                  gaccg uc  cga cg g
----ugaauua   c             c                        -----------aguuugg     g  gc   a  a 


Annotation confidence Medium
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Genome context
5: 26915329-26915489 [-]

Database links

Mature osa-miR2869-5p

Accession MIMAT0056137
Description Oryza sativa osa-miR2869-5p mature miRNA
Sequence 29 - UUGGGAGGUGGUGAGUACUAAG - 50
Evidence experimental
unknown

Mature osa-miR2869-3p

Accession MIMAT0013816
Description Oryza sativa osa-miR2869-3p mature miRNA
Sequence 115 - CUUGGUACUCAUUACCUCCCG - 135
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 19903869
    Rice MicroRNA effector complexes and targets
    "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
    "Plant Cell (2009) 21:3421-3435