Accession
MI0011868
Description
Medicago truncatula
mtr-MIR169j precursor miRNA
Literature search
12 open access papers mention mtr-MIR169j
(53 sentences)
(53 sentences)
Sequence
5858
reads,
66.0
reads per million, 99 experiments
agagguagagagaguauauuUGAGCCAGGAUGACUUGCCGGcauuugcuguaaauguagaagaaucccuucucacaauuaagguguuguuGGCGAGGAAUCUAGGCUCAUauuugcucucuuuccacuca
.((((.((((((((((.((.((((((.((((..((((((((((..((((.(((.((((((((.....))))).))).))).)))).))))))))))..)))).)))))).)).)))))))))).).))).
.((((.((((((((((.((.((((((.((((..((((((((((..((((.(((.((((((((.....))))).))).))).)))).))))))))))..)))).)))))).)).)))))))))).).))).
Structure
a - u u u A GA uu g a - a gag g agagagagua au UGAGCC GGAU CUUGCCGGca ugcu uaa ugu agaag a ||| | |||||||||| || |||||| |||| |||||||||| |||| ||| ||| ||||| u cuc c uuucucucgu ua ACUCGG UCUA GAGCGGuugu gugg auu aca ucuuc c a a c u U A AG -u a a c c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2: 13454079-13454208 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mtr-MIR169j
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR169j-5p
| Accession | MIMAT0013321 |
| Description | Medicago truncatula mtr-miR169j-5p mature miRNA |
| Sequence | 21 - UGAGCCAGGAUGACUUGCCGG - 41 |
| Evidence |
experimental
Illumina [1] |
Mature mtr-miR169j-3p
| Accession | MIMAT0054852 |
| Description | Medicago truncatula mtr-miR169j-3p mature miRNA |
| Sequence | 91 - GGCGAGGAAUCUAGGCUCAU - 110 |
| Evidence |
experimental
unknown |
References
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