Accession
MI0011241
Description
Pristionchus pacificus
ppc-mir-2274 precursor miRNA
Sequence
1618
reads,
264.0
reads per million, 12 experiments
uggcugaguuuggcuacuCCGUUGACUGACGAGGGUAUUCacugauugcaaguugAACCCGUAGUCAAGUCUACGGAGcagccucucaagccaa
((((((((...((((.((((((.(((((((..((((..(((((.......)).)))))))...))).)))).)))))).)))).))).))))).
((((((((...((((.((((((.(((((((..((((..(((((.......)).)))))))...))).)))).)))))).)))).))).))))).
Structure
- - uuu a U - -GA AU - ga uggcu gag ggcu cuCCGU GACU GAC GGGU UCa cu u ||||| ||| |||| |||||| |||| ||| |||| ||| || u accga cuc ccga GAGGCA CUGA CUG CCCA Agu ga g a a --u c U A AUG -- u ac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000007.1: 1081291-1081384 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppc-mir-2274
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2274-5p
| Accession | MIMAT0056975 |
| Description | Pristionchus pacificus ppc-miR-2274-5p mature miRNA |
| Sequence | 19 - CCGUUGACUGACGAGGGUAUUC - 40 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2274-3p
| Accession | MIMAT0011733 |
| Description | Pristionchus pacificus ppc-miR-2274-3p mature miRNA |
| Sequence | 56 - AACCCGUAGUCAAGUCUACGGAG - 78 |
| Evidence |
experimental
454 [1] |
References
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