Accession
MI0011235
Description
Pristionchus pacificus
ppc-mir-2273 precursor miRNA
Sequence
294
reads,
13.0
reads per million, 11 experiments
uucucaucgauugaucgucUCUCGAAAGCGGCACAUGCCAUCCgaauuacauagugaugaUGACAUGUCCCCGUUCGAGAGAUGcgcucucgaguagaa
.(((..((((..(..((((((((((..((((.(((((.((((...(((((...))))))))).)))))..))))))))))))))..)..))))..))).
.(((..((((..(..((((((((((..((((.(((((.((((...(((((...))))))))).)))))..))))))))))))))..)..))))..))).
Structure
u ca uu au AA -C C Cga a ucu ucga g cgucUCUCGA GCGG ACAUG CAUC auuac ||| |||| | |||||||||| |||| ||||| |||| ||||| u aga agcu c GUAGAGAGCU UGCC UGUAC GUag uagug a ug cu gc -- CC A --- a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000073.1: 220330-220428 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from ppc-mir-2273
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2273-5p
| Accession | MIMAT0011730 |
| Description | Pristionchus pacificus ppc-miR-2273-5p mature miRNA |
| Sequence | 20 - UCUCGAAAGCGGCACAUGCCAUCC - 43 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2273-3p
| Accession | MIMAT0056972 |
| Description | Pristionchus pacificus ppc-miR-2273-3p mature miRNA |
| Sequence | 61 - UGACAUGUCCCCGUUCGAGAGAUG - 84 |
| Evidence |
experimental
454 [1] |
References
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