Accession
MI0011204
Description
Pristionchus pacificus
ppc-mir-2266 precursor miRNA
Sequence
83226
reads,
8484.0
reads per million, 12 experiments
auucguuccucagcgcccucggAACCCGAUUGUGUCUAGUGUUCugugauuacgaagcaugaGCACUAGGUACUCUCAGGUCCCgagcggaggaaccgaa
.((((((((((..(((..((((.(((.((..((((((((((((((((.........))).)))))))))))))..)).))).))))))))))))).))))
.((((((((((..(((..((((.(((.((..((((((((((((((((.........))).)))))))))))))..)).))).))))))))))))).))))
Structure
a - ag cc A C UU - gau uucg uuccuc cgc ucgg ACC GA GUGUCUAGUGUUC ugu u |||| |||||| ||| |||| ||| || ||||||||||||| ||| a aagc aaggag gcg agCC UGG CU CAUGGAUCACGag acg c - c -- -- C A CU u aag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000024.1: 401456-401555 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from ppc-mir-2266
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2266-5p
| Accession | MIMAT0011701 |
| Description | Pristionchus pacificus ppc-miR-2266-5p mature miRNA |
| Sequence | 23 - AACCCGAUUGUGUCUAGUGUUC - 44 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2266-3p
| Accession | MIMAT0056954 |
| Description | Pristionchus pacificus ppc-miR-2266-3p mature miRNA |
| Sequence | 63 - GCACUAGGUACUCUCAGGUCCC - 84 |
| Evidence |
experimental
454 [1] |
References
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