Accession
MI0011201
Description
Pristionchus pacificus
ppc-mir-2264 precursor miRNA
Sequence
550
reads,
127.0
reads per million, 12 experiments
gcacaguccacgccgcgggUAUCACAGCGCACAACGGCGAUgagugucacuguacgaaauauCCCCGGAUGCGCACUGUGAAGCCcgcggauggaccacugc
(((..(((((..((((((((.((((((.((.((.(((.((((..(((......)))...)))).)))..)).)).)))))).)))))))).)))))...)))
(((..(((((..((((((((.((((((.((.((.(((.((((..(((......)))...)))).)))..)).)).)))))).)))))))).)))))...)))
Structure
-ca cg A C A -A C -ag ca gca gucca ccgcgggU UCACAG GC CA CGG GAUg ugu c ||| ||||| |||||||| |||||| || || ||| |||| ||| cgu caggu ggcgcCCG AGUGUC CG GU GCC Cuau gca u cac -a A A C AG C aaa ug
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000131.1: 545120-545221 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppc-mir-2264
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2264-5p
| Accession | MIMAT0011698 |
| Description | Pristionchus pacificus ppc-miR-2264-5p mature miRNA |
| Sequence | 20 - UAUCACAGCGCACAACGGCGAU - 41 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2264-3p
| Accession | MIMAT0056953 |
| Description | Pristionchus pacificus ppc-miR-2264-3p mature miRNA |
| Sequence | 63 - CCCCGGAUGCGCACUGUGAAGCC - 85 |
| Evidence |
experimental
454 [1] |
References
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