Accession
MI0011187
Description
Pristionchus pacificus
ppc-mir-2261 precursor miRNA
Sequence
77923
reads,
9305.0
reads per million, 12 experiments
cguugcuguuAUUCGUUCACCGUUGGCUAAACUcagagcacucgugcagUUUGGCAACUCAUGAACGAAUGacggcuccgg
((..(((((((((((((((..((((.(((((((((((....)).)).)))))))))))...)))))))))))))))..)).
((..(((((((((((((((..((((.(((((((((((....)).)).)))))))))))...)))))))))))))))..)).
Structure
- uu -CC G - - g cg gcuguuAUUCGUUCA GUUG CUAAACU ca ga c || ||||||||||||||| |||| ||||||| || || gc cggcaGUAAGCAAGU CAAC GGUUUga gu cu a g cu ACU - c g c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000015.1: 215648-215728 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppc-mir-2261
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2261-5p
| Accession | MIMAT0056942 |
| Description | Pristionchus pacificus ppc-miR-2261-5p mature miRNA |
| Sequence | 11 - AUUCGUUCACCGUUGGCUAAACU - 33 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2261-3p
| Accession | MIMAT0011687 |
| Description | Pristionchus pacificus ppc-miR-2261-3p mature miRNA |
| Sequence | 50 - UUUGGCAACUCAUGAACGAAUG - 71 |
| Evidence |
experimental
454 [1] |
References
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