Accession
MI0011183
Description
Pristionchus pacificus
ppc-mir-2236a precursor miRNA
Sequence
2498
reads,
188.0
reads per million, 12 experiments
cgaucgauaaucauuccgUACCUGAGGUGGAUUAUUCACUugauauuggaacuucagUGAUUUAAUCCAUCUGAGGAGCCgaaauaucgauc
.((((((((....(((.((.(((.((((((((((.(((((.((..........)))))))..)))))))))).))).)).))).))))))))
.((((((((....(((.((.(((.((((((((((.(((((.((..........)))))))..)))))))))).))).)).))).))))))))
Structure
c auca c A G -U u uauu gaucgaua uuc gU CCU AGGUGGAUUA UCACU ga g |||||||| ||| || ||| |||||||||| ||||| || cuagcuau aag CG GGA UCUACCUAAU AGUga cu g - ---a C A G UU - ucaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000093.1: 3220764-3220855 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-2236a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2236a-5p
| Accession | MIMAT0011683 |
| Description | Pristionchus pacificus ppc-miR-2236a-5p mature miRNA |
| Sequence | 19 - UACCUGAGGUGGAUUAUUCACU - 40 |
| Evidence |
experimental
454 [1] |
Mature ppc-miR-2236a-3p
| Accession | MIMAT0056940 |
| Description | Pristionchus pacificus ppc-miR-2236a-3p mature miRNA |
| Sequence | 58 - UGAUUUAAUCCAUCUGAGGAGCC - 80 |
| Evidence |
experimental
454 [1] |
References
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