Stem-loop ppc-mir-2255

Accession

MI0011172

Description

Pristionchus pacificus ppc-mir-2255 precursor miRNA

Sequence

gagcuugccccuucuugccaauacuauucaaugacaaucuaauccgguaaugguuaAAUUGCAUUGAUUGGUAUUGGCaaacgcuc
((((..........((((((((((((.((((((.((((.(((.(((....)))))).)))))))))).))))))))))))..))))

Structure

    uugccccuuc            u      a    c   u   g 
gagc          uugccaauacua ucaaug caau uaa ccg u
||||          |||||||||||| |||||| |||| ||| |||  
cucg          aaCGGUUAUGGU AGUUAC GUUA auu ggu a
    --------ca            U      -    A   -   a 

Annotation confidence Not enough data

Genome context

ABKE03000104.1: 1644164-1644249 [-]

Mature ppc-miR-2255

• Accession: MIMAT0011679
• Description: Pristionchus pacificus ppc-miR-2255 mature miRNA
• Sequence: 57 - AAUUGCAUUGAUUGGUAUUGGC - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074