Stem-loop ppc-mir-124

Accession

MI0011133

Description

Pristionchus pacificus ppc-mir-124 precursor miRNA

Literature search

1 open access papers mention ppc-mir-124
(6 sentences)

Sequence

gaagggucguuaauucacuucgcuuucaccggugacuuuagugcuuugucacagagagaacUAAGGCACGCGGUGAAUGCCaagagaauaacgaauccauca
((.(((((((((.(((.(((.((.((((((((((.(((((((.((((.......)))).)))))))))).))))))).)).))).)))))))).)))).)).

Structure

-  a    -     a   a   c  u       -   a       g    gu 
 ga gggu cguua uuc cuu gc uucaccg gug cuuuagu cuuu  c
 || |||| ||||| ||| ||| || ||||||| ||| ||||||| ||||  a
 cu ccua gcaau aag gaa CG AAGUGGC CAC GGAAUca gaga  c
a  a    a     -   a   C  U       G   -       a    ga 

Annotation confidence Not enough data

Genome context

ABKE03000070.1: 151826-151927 [-]

Mature ppc-miR-124

• Accession: MIMAT0011645
• Description: Pristionchus pacificus ppc-miR-124 mature miRNA
• Sequence: 62 - UAAGGCACGCGGUGAAUGCC - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074