miRBase entry: crm-mir-247

Stem-loop crm-mir-247


Accession
MI0011097
Description
Caenorhabditis remanei crm-mir-247 precursor miRNA


Sequence

12785 reads, 123.0 reads per million, 9 experiments
caaacccaaucuucuuccgagcAGAGAAUCGCCCCUAGUGACCcaccacaguagugugaggUGACUAGAGCCAAUUCUCUUCuugguugcaaggugcccuuug
((((....((((((..(((((.(((((((.((..(((((.((((((.((....))))).))).))))).))..))))))).)))))..).)))))....))))

Structure
    ccca     - uu     c       -C  CC     G   -   c  a 
caaa    aucuu c  ccgag AGAGAAU  GC  CUAGU ACC cac ac g
||||    ||||| |  ||||| |||||||  ||  ||||| ||| ||| ||  
guuu    uggaa g  gguuC UCUCUUA  CG  GAUCA Ugg gug ug u
    cccg     c uu     U       AC  -A     G   a   -  a 


Annotation confidence High
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Genome context
Crem_Contig0: 2834956-2835058 [-]

Database links

Mature crm-miR-247-5p

Accession MIMAT0056866
Description Caenorhabditis remanei crm-miR-247-5p mature miRNA
Sequence 23 - AGAGAAUCGCCCCUAGUGACC - 43
Evidence experimental
454 [1]

Mature crm-miR-247-3p

Accession MIMAT0011601
Description Caenorhabditis remanei crm-miR-247-3p mature miRNA
Sequence 62 - UGACUAGAGCCAAUUCUCUUC - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 19755563
    Repertoire and evolution of miRNA genes in four divergent nematode species
    "de Wit E, Linsen SE, Cuppen E, Berezikov E"
    "Genome Res (2009) 19:2064-2074