Stem-loop crm-mir-244

Accession

MI0011087

Description

Caenorhabditis remanei crm-mir-244 precursor miRNA

Literature search

1 open access papers mention crm-mir-244
(1 sentences)

Sequence

cuauuauuccuucuccaguuucucgaucUCUUUGGUUGUACAAAGUGGUAUGgcacuucucaauagucugcucaUACCGCUUUUCGGCUAAAGGaaucgagucuuuggugucauuaauac
.(((((......(.((((...((((((.((((((((((...((((((((((((((((.......)))..)).))))))))))).)))))))))).))))))...)))).)....))))).

Structure

c     uuccuu u    uuu      c          UAC           -  --   uc 
 uauua      c ccag   cucgau UCUUUGGUUG   AAAGUGGUAUG gc  acu  u
 |||||      | ||||   |||||| ||||||||||   ||||||||||| ||  |||  c
 auaau      g gguu   gagcua GGAAAUCGGC   UUUCGCCAUac cg  uga  a
c     --uacu u    ucu      a          --U           u  uc   ua 

Annotation confidence Not enough data

Genome context

Crem_Contig11: 469720-469839 [-]

Mature crm-miR-244-5p

• Accession: MIMAT0011583
• Description: Caenorhabditis remanei crm-miR-244-5p mature miRNA
• Sequence: 29 - UCUUUGGUUGUACAAAGUGGUAUG - 52
• Evidence: experimental ; 454 [1]

Mature crm-miR-244-3p

• Accession: MIMAT0011584
• Description: Caenorhabditis remanei crm-miR-244-3p mature miRNA
• Sequence: 75 - UACCGCUUUUCGGCUAAAGG - 94
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074