Stem-loop crm-mir-124a

Accession

MI0011060

Description

Caenorhabditis remanei crm-mir-124a precursor miRNA

Sequence

1478 reads, 13.0 reads per million, 8 experiments

uccagaugucacuugGCAUACACCUGAGUGACUUUAGUggacaucucaaguuuccaacUAAGGCACGCGGUGAAUGCCacguggcaauucugga
((((((((((((.((((((.((((.(.(((.((((((((((.((.....)).))).)))))))))).))))).)))))).))))))..))))))

Structure

      --      u      A    U A   A       -   c  c 
uccaga  ugucac ugGCAU CACC G GUG CUUUAGU gga au u
||||||  |||||| |||||| |||| | ||| ||||||| ||| || c
aggucu  acggug aCCGUA GUGG C CAC GGAAUca ccu ug a
      ua      c      A    - G   -       a   u  a 

Annotation confidence High

Genome context

Crem_Contig67: 54958-55051 [+]

Mature crm-miR-124a-5p

• Accession: MIMAT0056860
• Description: Caenorhabditis remanei crm-miR-124a-5p mature miRNA
• Sequence: 16 - GCAUACACCUGAGUGACUUUAGU - 38
• Evidence: experimental ; 454 [1]

Mature crm-miR-124a-3p

• Accession: MIMAT0011541
• Description: Caenorhabditis remanei crm-miR-124a-3p mature miRNA
• Sequence: 59 - UAAGGCACGCGGUGAAUGCC - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074