Stem-loop cbr-mir-35b-2

Accession

MI0010990

Description

Caenorhabditis briggsae cbr-mir-35b-2 precursor miRNA

Sequence

ucugauagucuggaucgaaucuuugcugguuuccucugcggugauauuccaaaugaagugcuuaUCACCGGGUGAAAACUGGUAGAGauccgaucccgucgga
((((((.....((((((.((((((((((((((.(.((.((((((((................)))))))))).).)))))))))))))).)))))).))))))

Structure

      agucu      a              c u  g        uuccaaa 
ucugau     ggaucg aucuuugcugguuu c cu cggugaua       u
||||||     |||||| |||||||||||||| | || ||||||||        
aggcug     ccuagc uaGAGAUGGUCAAA G GG GCCACUau       g
      ----c      c              A U  -        ucgugaa 

Annotation confidence Not enough data

Genome context

chrX: 15372023-15372125 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35b-2

Mature cbr-miR-35b

• Accession: MIMAT0011483
• Description: Caenorhabditis briggsae cbr-miR-35b mature miRNA
• Sequence: 65 - UCACCGGGUGAAAACUGGUAGAG - 87
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074