Stem-loop osa-MIR2121a

Accession

MI0010709

Description

Oryza sativa osa-MIR2121a precursor miRNA

Literature search

1 open access papers mention osa-MIR2121a
(1 sentences)

Sequence

179173 reads, 560.0 reads per million, 142 experiments

gUGCUAAUCUAUCGCUCCGUUUUCcgugcggaacacagccgcggccuuaggcuguguucccaucuaccagaugggaacucauuuccccugcacggAAAACGGAGCGGUCCAUUAGCGCGu
((((((((..(((((((((((((((((((((.((((((((.........))))))))((((((((...))))))))...........)))))))))))))))))))))..))))))))..

Structure

--        CU                     -----------------------------a        gcg 
  gUGCUAAU  AUCGCUCCGUUUUCcgugcgg                              acacagcc   g
  ||||||||  |||||||||||||||||||||                              ||||||||   c
  CGCGAUUA  UGGCGAGGCAAAAggcacguc                              ugugucgg   c
uG        CC                     cccuuuacucaaggguagaccaucuacccu        auu 

Annotation confidence High

Comments

Huang et al. incorrectly named this sequence miR602 in [1].

Genome context

1: 16373428-16373547 [+]

Mature osa-miR2121a-5p

• Accession: MIMAT0056110
• Description: Oryza sativa osa-miR2121a-5p mature miRNA
• Sequence: 2 - UGCUAAUCUAUCGCUCCGUUUUC - 24
• Evidence: experimental ; unknown

Mature osa-miR2121a-3p

• Accession: MIMAT0011180
• Description: Oryza sativa osa-miR2121a-3p mature miRNA
• Sequence: 96 - AAAACGGAGCGGUCCAUUAGCGCG - 119
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19081140
   Heavy metal-regulated new microRNAs from rice
   "Huang SQ, Peng J, Qiu CX, Yang ZM"
   "J Inorg Biochem (2009) 103:282-287