Stem-loop osa-MIR2120

Accession

MI0010708

Description

Oryza sativa osa-MIR2120 precursor miRNA

Literature search

3 open access papers mention osa-MIR2120
(3 sentences)

Sequence

231731 reads, 911.0 reads per million, 142 experiments

AACAACCGGGACUAAAGAUaucuugauaucuuuaaccgggaguaaagaAAAGAUCUUUAGUCCCGGUUGUUCu
((((((((((((((((((..((((....((((((........)))))).))))))))))))))))))))))..

Structure

--                  Ua    gaua      acc 
  AACAACCGGGACUAAAGA  ucuu    ucuuua   g
  ||||||||||||||||||  ||||    ||||||    
  UUGUUGGCCCUGAUUUCU  AGAA    agaaau   g
uC                  --    ---A      gag 

Annotation confidence Medium

Comments

Huang et al. incorrectly named this sequence miR601 in [1].

Genome context

8: 22733773-22733845 [+]

Mature osa-miR2120-5p

• Accession: MIMAT0056109
• Description: Oryza sativa osa-miR2120-5p mature miRNA
• Sequence: 1 - AACAACCGGGACUAAAGAU - 19
• Evidence: experimental ; unknown

Mature osa-miR2120-3p

• Accession: MIMAT0011179
• Description: Oryza sativa osa-miR2120-3p mature miRNA
• Sequence: 49 - AAAGAUCUUUAGUCCCGGUUGUUC - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19081140
   Heavy metal-regulated new microRNAs from rice
   "Huang SQ, Peng J, Qiu CX, Yang ZM"
   "J Inorg Biochem (2009) 103:282-287