Stem-loop osa-MIR2105

Accession

MI0010566

Description

Oryza sativa osa-MIR2105 precursor miRNA

Literature search

1 open access papers mention osa-MIR2105
(1 sentences)

Sequence

6023 reads, 26.0 reads per million, 115 experiments

UUUGGAUCUGUGAUGUAUUUcauuaagaauuugaguuguauuuuuuugagaauUUGUGAUGUGAAUGAUUCAUugauuuggga
((((((((.((((..((((((((((.((((((..(...........)..)))))).))))).)))))..)))).)))))))).

Structure

-        U    UG     -     a      ga uugu 
 UUUGGAUC GUGA  UAUUU cauua gaauuu  g    a
 |||||||| ||||  ||||| ||||| ||||||  |    u
 ggguuuag UACU  GUAAG GUAGU UUuaag  u    u
a        u    UA     U     G      ag uuuu 

Annotation confidence Low

Genome context

12: 4602439-4602521 [+]

Mature osa-miR2105-5p

• Accession: MIMAT0056107
• Description: Oryza sativa osa-miR2105-5p mature miRNA
• Sequence: 1 - UUUGGAUCUGUGAUGUAUUU - 20
• Evidence: experimental ; unknown

Mature osa-miR2105-3p

• Accession: MIMAT0010073
• Description: Oryza sativa osa-miR2105-3p mature miRNA
• Sequence: 54 - UUGUGAUGUGAAUGAUUCAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930