Stem-loop osa-MIR2102

Accession

MI0010562

Description

Oryza sativa osa-MIR2102 precursor miRNA

Literature search

2 open access papers mention osa-MIR2102
(3 sentences)

Sequence

114280 reads, 743.0 reads per million, 110 experiments

ccGAUGGUAGGGCAAGCCGCCGCCGCCaccaccaccgcugccaugcggaugacaaacuucuagcucuucggAUCCAUGGUGCCGGUUCCGGUggcguccauggcgacgg
(((.((.((((((..((((((((((.(((((.((((((......)))).)).......(((........)))....))))).)))...))))))))))).)).)).)))

Structure

   A  G  -    AA       ---   C     ccaccgcugccaugcggaugacaaacu   agc 
ccG UG UA GGGC  GCCGCCG   CCG Cacca                           ucu   u
||| || || ||||  |||||||   ||| |||||                           |||    
ggc gc gu ccug  cggUGGC   GGC GUGGU                           Agg   c
   a  g  a    --       CUU   C     -----------------------ACCU   cuu 

Annotation confidence Low

Genome context

5: 18250483-18250591 [+]

Mature osa-miR2102-5p

• Accession: MIMAT0010068
• Description: Oryza sativa osa-miR2102-5p mature miRNA
• Sequence: 3 - GAUGGUAGGGCAAGCCGCCGCCGCC - 27
• Evidence: experimental ; Illumina [1]

Mature osa-miR2102-3p

• Accession: MIMAT0010069
• Description: Oryza sativa osa-miR2102-3p mature miRNA
• Sequence: 72 - AUCCAUGGUGCCGGUUCCGGU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930