Stem-loop osa-MIR2099

Accession

MI0010559

Description

Oryza sativa osa-MIR2099 precursor miRNA

Literature search

1 open access papers mention osa-MIR2099
(1 sentences)

Sequence

6015 reads, 101.0 reads per million, 52 experiments

cugcUUUGUGAAUAUGUUUGUACAAGCUuuacaaAGCUGUAGCGUUAUUCCAGAGCAGuu
((((((((.((((((((...((((.((((....))))))))))).)))))))))))))..

Structure

--        U     -   UUG    A    u 
  cugcUUUG GAAUA UGU   UACA GCUu a
  |||||||| ||||| |||   |||| ||||  
  GACGAGAC CUUAU GCG   AUGU CGAa c
uu        -     U   ---    -    a 

Annotation confidence Medium

Genome context

1: 42570854-42570913 [+]

Mature osa-miR2099-5p

• Accession: MIMAT0010062
• Description: Oryza sativa osa-miR2099-5p mature miRNA
• Sequence: 5 - UUUGUGAAUAUGUUUGUACAAGCU - 28
• Evidence: experimental ; Illumina [1]

Mature osa-miR2099-3p

• Accession: MIMAT0010063
• Description: Oryza sativa osa-miR2099-3p mature miRNA
• Sequence: 35 - AGCUGUAGCGUUAUUCCAGAGCAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930