Stem-loop osa-MIR2098

Accession

MI0010558

Description

Oryza sativa osa-MIR2098 precursor miRNA

Literature search

1 open access papers mention osa-MIR2098
(1 sentences)

Sequence

2174 reads, 7.0 reads per million, 106 experiments

cagucuugugccauucccguggaggcagccgauGAGGAUUAACGGUUUGUCAAGCGGAGUGCacuucuaaug
.......((((.(((((.((...((((((((.(((...))).))).)))))..)))))))))))........

Structure

-cagucuu    c     c  gga     -   a   G 
        gugc auucc gu   ggcag ccg uGA  
        |||| ||||| ||   ||||| ||| ||| G
        caCG UGAGG CG   CUGUU GGC AUU  
guaaucuu    -     -  -AA     U   A   A 

Annotation confidence Low

Genome context

10: 18080242-18080313 [-]

Mature osa-miR2098-5p

• Accession: MIMAT0010060
• Description: Oryza sativa osa-miR2098-5p mature miRNA
• Sequence: 34 - GAGGAUUAACGGUUUGUCAAGCGG - 57
• Evidence: experimental ; Illumina [1]

Mature osa-miR2098-3p

• Accession: MIMAT0010061
• Description: Oryza sativa osa-miR2098-3p mature miRNA
• Sequence: 39 - UUAACGGUUUGUCAAGCGGAGUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930