Stem-loop osa-MIR2094

Accession

MI0010554

Description

Oryza sativa osa-MIR2094 precursor miRNA

Literature search

3 open access papers mention osa-MIR2094
(3 sentences)

Sequence

8712 reads, 84.0 reads per million, 73 experiments

ucgggAGAAGUGUGGCUGCUAGGCUCCUgggugcaaccacacagagcuguggcAUCCACGUCGAGCGAUGGC
(((...((..(((((.((((((((((.((.(((....))).))))))).))))).)))))))...)))....

Structure

----   ggA  AG     C     -     C  g   c 
    ucg   GA  UGUGG UGCUA GGCUC Ug gug a
    |||   ||  ||||| ||||| ||||| || |||  
    AGC   CU  GCACC Acggu ucgag ac cac a
CGGU   GAG  --     U     g     -  a   c 

Annotation confidence Low

Genome context

2: 29779638-29779709 [+]

Mature osa-miR2094-5p

• Accession: MIMAT0010052
• Description: Oryza sativa osa-miR2094-5p mature miRNA
• Sequence: 6 - AGAAGUGUGGCUGCUAGGCUCCU - 28
• Evidence: experimental ; Illumina [1]

Mature osa-miR2094-3p

• Accession: MIMAT0010053
• Description: Oryza sativa osa-miR2094-3p mature miRNA
• Sequence: 54 - AUCCACGUCGAGCGAUGGC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930